Selected Publications
The Galaxy platform for accessible, reproducible, and collaborative data analyses: 2024 update Nucleic Acid Research 2023 PMID:38769056
Expression Atlas update: insights from sequencing data at both bulk and single cell level Nucleic Acid Research 2023 PMID:37992296
Convergent gene loss in aquatic plants predicts new components of plant immunity and drought response Plant Cell, 2020, PMID:32409319
TGAC Browser: An open-source genome browser for non-model organisms bioRxiv, 2019, DOI:10.1101/677658
GeneSeqToFamily: a Galaxy workflow to find gene families based on the Ensembl Compara GeneTrees pipeline GigaScience, 2018, PMID:29425291
Aequatus: An open-source homology browser GigaScience, 2018, PMID:30395211
ViCTree: An automated framework for taxonomic classification from protein sequences Bioinformatics, 2018, PMID:29474519
transPLANT Resources for Triticeae Genomic Data The Plant Genome, 2016, PMID:27898761
BioJS: an open source standard for biological visualisation–its status in 2014 F1000Research, 2014, PMID:25075290
Anatomy of BioJS, an open source community for the life sciences eLife, 2015, PMID:26153621
StatsDB: platform-agnostic storage and understanding of next generation sequencing run metrics F1000Research, 2014, PMID:24627795
wigExplorer, a BioJS component to visualise wig data F1000 Research, 2014, PMID:27781080